Geneid (http://genome.crg.es/software/geneid/) ab initio gene predictions on the repeat-masked Jul. 2014 (RGSC 6.0/rn6) assembly of the rat genome (rn6, RGSC Rnor_6.0).

Geneid predicted 41,652 gene models on this version of the rat assembly (made up of 883 genomics sequences including 22 chromosomes)

This site contains the ab initio gene predictions in several different formats:

1. gff3 
2. (geneid-derived) gff2
3. gtf 
4. prot (amino acid sequences of the predicted proteins)
5. CDS (CDS sequences of the predicted genes)