BLASTN 2.0MP-WashU [13-Dec-2000] [decunix4.0-ev5-L64 09:44:13 06-Sep-2001]

Copyright (C) 1996-2000 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2000) http://blast.wustl.edu

Notice:  this program and its default parameter settings are optimized to find
nearly identical sequences rapidly.  To identify weak similarities encoded in
nucleic acid, use BLASTX, TBLASTN or TBLASTX.

Query=  chr22_347
        (270 letters)

Database:  /bioinfo/gapdb/blastdb/ensembl_cdna
           23,929 sequences; 33,556,347 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

ENST00000255825 Gene:ENSG00000133455 Clone:AP000344 Conti...   492  5.2e-140  1



>ENST00000255825 Gene:ENSG00000133455 Clone:AP000344 Contig:AP000344.1.1.186421
            Chr:chr22 basepair:20357040
        Length = 351

  Plus Strand HSPs:

 Score = 492 (492.3 bits), Expect = 5.2e-140, P = 5.2e-140
 Identities = 246/246 (100%), Positives = 246/246 (100%), Strand = Plus / Plus

Query:    19 CTGCAGGTAGTTGCACAATTCTGTGGGTACAATGCATCAGACTCTGAGGCCCCACTGAGG 78
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   106 CTGCAGGTAGTTGCACAATTCTGTGGGTACAATGCATCAGACTCTGAGGCCCCACTGAGG 165

Query:    79 TGCCTGAGGACAAAATCCTCCAAGGAGCTGCTGACCCTCAGCCAGAAAACAAAGGCTTTC 138
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   166 TGCCTGAGGACAAAATCCTCCAAGGAGCTGCTGACCCTCAGCCAGAAAACAAAGGCTTTC 225

Query:   139 ACTCAAGTGGTTGATGGTGCTTTCTTTCCTAATGAGCCTCTAGATCTATTGTCTCAGAAA 198
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   226 ACTCAAGTGGTTGATGGTGCTTTCTTTCCTAATGAGCCTCTAGATCTATTGTCTCAGAAA 285

Query:   199 GCATTTAAAGCAATTCCTTCCATCATCGGAGTCAATAACCCCGAGTGTGGCTTCCCGCTG 258
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   286 GCATTTAAAGCAATTCCTTCCATCATCGGAGTCAATAACCCCGAGTGTGGCTTCCCGCTG 345

Query:   259 CCTATG 264
             ||||||
Sbjct:   346 CCTATG 351


Parameters:
  warnings
  E=0.01
  cpus=8
  W=13
  hitdist=28
  X=50
  B=20
  V=20
  M=2
  N=-9
  S2=100
  S=100
  hspmax=10
  filter=dust
  progress=0

  ctxfactor=2.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Strand MatID Matrix name     Lambda    K       H      Lambda    K       H
   +1      0   +2,-9           0.692   0.562   1.37     same    same    same
               Q=10,R=10       0.692   0.562   1.37      n/a     n/a     n/a
   -1      0   +2,-9           0.692   0.562   1.37     same    same    same
               Q=10,R=10       0.692   0.562   1.37      n/a     n/a     n/a

  Query
  Strand MatID  Length  Eff.Length     E     S  W   T  X   E2      S2
   +1      0      270       270   7.0e-21  100 13 n/a 50  9.9e-26 100
                                                      18  9.9e-26 100
   -1      0      270       270   7.0e-21  100 13 n/a 50  9.9e-26 100
                                                      18  9.9e-26 100


Statistics:

  Database:  /bioinfo/gapdb/blastdb/ensembl_cdna
   Title:  /bioinfo/gapdb/blastdb/ensembl_cdna
   Posted:  4:53:09 PM EST Aug 9, 2001
   Format:  BLAST-1.4
   # of letters in database:  33,556,347
   # of sequences in database:  23,929
   # of database sequences satisfying E:  1
  No. of states in DFA:  206 (412 KB)
  Total size of DFA:  23 KB (1034 KB)
  Time to generate neighborhood:  0.00u 0.03s 0.03t  Elapsed: 00:00:00
  No. of threads or processors used:  4
  Search cpu time:  0.38u 0.06s 0.45t  Elapsed: 00:00:01
  Total cpu time:  0.41u 0.11s 0.53t  Elapsed: 00:00:01
  Start:  Thu Sep 27 13:40:16 2001   End:  Thu Sep 27 13:40:17 2001

WARNINGS SUPPRESSED:  2