BLASTN 2.0MP-WashU [13-Dec-2000] [decunix4.0-ev5-L64 09:44:13 06-Sep-2001] Copyright (C) 1996-2000 Washington University, Saint Louis, Missouri USA. All Rights Reserved. Reference: Gish, W. (1996-2000) http://blast.wustl.edu Notice: this program and its default parameter settings are optimized to find nearly identical sequences rapidly. To identify weak similarities encoded in nucleic acid, use BLASTX, TBLASTN or TBLASTX. Query= chr22_170 (369 letters) Database: /bioinfo/gapdb/blastdb/ensembl_cdna 23,929 sequences; 33,556,347 total letters. Searching....10....20....30....40....50....60....70....80....90....100% done Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N ENST00000006876 Gene:ENSG00000092635 Clone:AC005815 Conti... 655 2.8e-188 1 ENST00000215085 Gene:ENSG00000099355 Clone:AC027612 Conti... 629 2.0e-180 1 >ENST00000006876 Gene:ENSG00000092635 Clone:AC005815 Contig:AC005815.1.1.183085 Chr:chr1 basepair:130178593 Length = 3707 Plus Strand HSPs: Score = 655 (655.1 bits), Expect = 2.8e-188, P = 2.8e-188 Identities = 350/355 (98%), Positives = 350/355 (98%), Strand = Plus / Plus Query: 14 GTGTGGTGTCAGCACAGCGGCAGGTCACCGTTCAGGAAGGACCCTTGTACCGCACGGAGG 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14 GTGTGGTGTCAGCACAGCGGCAGGTCACCGTTCAGGAAGGACCCTTGTACCGCACGGAGG 73 Query: 74 GCTCCCACATCACTATCTGGTGCAATGTGAGTGGCTACCAGGGACCTTCTGAACAGAATT 133 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 74 GCTCCCACATCACTATCTGGTGCAATGTGAGTGGCTACCAGGGACCTTCTGAGCAGAATT 133 Query: 134 TCCAGTGGTCCATTTACCTGCCTTCGTCGCCAGAGCGAGAGGTGCAGATCGTCAGCACCA 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134 TCCAGTGGTCCATTTACCTGCCTTCGTCGCCAGAGCGAGAGGTGCAGATCGTCAGCACCA 193 Query: 194 TGGACTCTTCCTTCCCCTATGCCATCTACACCCAGCGCGTCCGCGGAGGGAAGATCTTCA 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 194 TGGACTCTTCCTTCCCCTATGCCATCTACACCCAGCGCGTCCGCGGAGGGAAGATCTTCA 253 Query: 254 TAGAAAGAGTCCAGGGGAACCCAACCCTATTGCACATCACAGATCTTCAGGCCCGGGATG 313 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 254 TAGAAAGAGTCCAGGGGAACTCAACCCTATTGCACATCACAGATCTTCAGGCCCGGGATG 313 Query: 314 CCGGGGAATATGAATGCCACACACCCAGCACCGAGAAGCAATACTTTGGGAGTTA 368 ||||||| ||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 314 CCGGGGAGTATGAATGCCACACACCCAGCACTGATAAGCAATACTTTGGGAGTTA 368 >ENST00000215085 Gene:ENSG00000099355 Clone:AC027612 Contig:AC027612.6.1.158052 Chr:chr1 basepair:169888863 Length = 1177 Plus Strand HSPs: Score = 629 (629.2 bits), Expect = 2.0e-180, P = 2.0e-180 Identities = 346/353 (98%), Positives = 346/353 (98%), Strand = Plus / Plus Query: 16 GTGGTGTCAGCACAGCGGCAGGTCACCGTTCAGGAAGGACCCTTGTACCGCACGGAGGGC 75 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1 GTGGTGTCAGCACAGCGGCAGGTCACCGTTCAGGAAGGACCCTTGTACCGCATGGAGGGC 60 Query: 76 TCCCACATCACTATCTGGTGCAATGTGAGTGGCTACCAGGGACCTTCTGAACAGAATTTC 135 |||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||| Sbjct: 61 TCCCACATCACTATCTGGTGCAATGTGAGTGGCTCCCAGGGACCTCCTGAGCAGAATTTC 120 Query: 136 CAGTGGTCCATTTACCTGCCTTCGTCGCCAGAGCGAGAGGTGCAGATCGTCAGCACCATG 195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 CAGTGGTCCATTTACCTGCCTTCGTCGCCAGAGCGAGAGGTGCAGATCGTCAGCACCATG 180 Query: 196 GACTCTTCCTTCCCCTATGCCATCTACACCCAGCGCGTCCGCGGAGGGAAGATCTTCATA 255 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 GACCCTTCCTTCCCCTATGCCATCTACACCCAGCGCGTCCGCGGAGGGAAGATCTTCATA 240 Query: 256 GAAAGAGTCCAGGGGAACCCAACCCTATTGCACATCACAGATCTTCAGGCCCGGGATGCC 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 GAAAGAGTCCAGGGGAACCCAACCCTATTGCACATCACAGATCTTCAGGCCCGGGATGCC 300 Query: 316 GGGGAATATGAATGCCACACACCCAGCACCGAGAAGCAATACTTTGGGAGTTA 368 || ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 301 GGAGAATATGAATGCCACACACCCAGCACCGATAAGCAATACTTTGGGAGTTA 353 Parameters: warnings E=0.01 cpus=8 W=13 hitdist=28 X=50 B=20 V=20 M=2 N=-9 S2=100 S=100 hspmax=10 filter=dust progress=0 ctxfactor=2.00 Query ----- As Used ----- ----- Computed ---- Strand MatID Matrix name Lambda K H Lambda K H +1 0 +2,-9 0.692 0.562 1.37 same same same Q=10,R=10 0.692 0.562 1.37 n/a n/a n/a -1 0 +2,-9 0.692 0.562 1.37 same same same Q=10,R=10 0.692 0.562 1.37 n/a n/a n/a Query Strand MatID Length Eff.Length E S W T X E2 S2 +1 0 369 369 1.0e-20 100 13 n/a 50 1.4e-25 100 18 1.4e-25 100 -1 0 369 369 1.0e-20 100 13 n/a 50 1.4e-25 100 18 1.4e-25 100 Statistics: Database: /bioinfo/gapdb/blastdb/ensembl_cdna Title: /bioinfo/gapdb/blastdb/ensembl_cdna Posted: 4:53:09 PM EST Aug 9, 2001 Format: BLAST-1.4 # of letters in database: 33,556,347 # of sequences in database: 23,929 # of database sequences satisfying E: 2 No. of states in DFA: 230 (460 KB) Total size of DFA: 31 KB (1038 KB) Time to generate neighborhood: 0.01u 0.03s 0.05t Elapsed: 00:00:00 No. of threads or processors used: 4 Search cpu time: 0.43u 0.10s 0.53t Elapsed: 00:00:01 Total cpu time: 0.48u 0.15s 0.63t Elapsed: 00:00:01 Start: Thu Sep 27 13:39:55 2001 End: Thu Sep 27 13:39:56 2001 WARNINGS SUPPRESSED: 2