BLASTN 2.0MP-WashU [13-Dec-2000] [decunix4.0-ev5-L64 09:44:13 06-Sep-2001]

Copyright (C) 1996-2000 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2000) http://blast.wustl.edu

Notice:  this program and its default parameter settings are optimized to find
nearly identical sequences rapidly.  To identify weak similarities encoded in
nucleic acid, use BLASTX, TBLASTN or TBLASTX.

Query=  chr22_153
        (795 letters)

Database:  /bioinfo/gapdb/blastdb/ensembl_cdna
           23,929 sequences; 33,556,347 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

ENST00000215739 Gene:ENSG00000099949 Clone:AC002472 Conti...   950  0.0       2



>ENST00000215739 Gene:ENSG00000099949 Clone:AC002472 Contig:AC002472.6.1.147086
            Chr:chr22 basepair:17985290
        Length = 4268

  Plus Strand HSPs:

 Score = 950 (949.8 bits), Expect = 0.0, Sum P(2) = 0.0
 Identities = 475/475 (100%), Positives = 475/475 (100%), Strand = Plus / Plus

Query:   320 GGGCCTTTACCACTGGGACCCCACCGGCCCCCCGTTACCACCACTCGGCCGTCGTCTATG 379
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   310 GGGCCTTTACCACTGGGACCCCACCGGCCCCCCGTTACCACCACTCGGCCGTCGTCTATG 369

Query:   380 GGAGCAGCATGTTTGTCTTTGGGGGTTACACTGGGGACATTTATTCCAATTCTAACTTGA 439
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   370 GGAGCAGCATGTTTGTCTTTGGGGGTTACACTGGGGACATTTATTCCAATTCTAACTTGA 429

Query:   440 AGAATAAAAACGACCTCTTTGAATACAAGTTTGCAACTGGCCAGTGGACGGAGTGGAAAA 499
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   430 AGAATAAAAACGACCTCTTTGAATACAAGTTTGCAACTGGCCAGTGGACGGAGTGGAAAA 489

Query:   500 TTGAAGGACGGTTGCCAGTCGCTAGGTCAGCCCATGGGGCCACGGTGTACAGTGACAAGC 559
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   490 TTGAAGGACGGTTGCCAGTCGCTAGGTCAGCCCATGGGGCCACGGTGTACAGTGACAAGC 549

Query:   560 TGTGGATCTTTGCTGGCTATGACGGCAACGCCAGGTTGAATGACATGTGGACAATTGGCC 619
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   550 TGTGGATCTTTGCTGGCTATGACGGCAACGCCAGGTTGAATGACATGTGGACAATTGGCC 609

Query:   620 TCCAGGACCGAGAGCTCACCTGCTGGGAGGAGGTGGCCCAGAGTGGCGAGATCCCCCCAT 679
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   610 TCCAGGACCGAGAGCTCACCTGCTGGGAGGAGGTGGCCCAGAGTGGCGAGATCCCCCCAT 669

Query:   680 CTTGCTGCAACTTCCCCGTGGCTGTGTGCCGGGACAAGATGTTTGTATTCTCTGGGCAAA 739
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   670 CTTGCTGCAACTTCCCCGTGGCTGTGTGCCGGGACAAGATGTTTGTATTCTCTGGGCAAA 729

Query:   740 GCGGAGCCAAAATAACCAACAACCTCTTCCAGTTTGAATTCAAGGACAAGACGTG 794
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   730 GCGGAGCCAAAATAACCAACAACCTCTTCCAGTTTGAATTCAAGGACAAGACGTG 784

 Score = 520 (520.3 bits), Expect = 0.0, Sum P(2) = 0.0
 Identities = 260/260 (100%), Positives = 260/260 (100%), Strand = Plus / Plus

Query:     5 CTGGACCGGGCAGCACGGGGGGGCAGATCGGGGCTGCGGCCCTGGCAGGCGGCGCGCGGT 64
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:     1 CTGGACCGGGCAGCACGGGGGGGCAGATCGGGGCTGCGGCCCTGGCAGGCGGCGCGCGGT 60

Query:    65 CCAAGGTAGCCCCGAGCGTGGACTTCGACCATAGCTGCTCGGACAGTGTCGAGTACCTGA 124
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    61 CCAAGGTAGCCCCGAGCGTGGACTTCGACCATAGCTGCTCGGACAGTGTCGAGTACCTGA 120

Query:   125 CGCTCAACTTCGGGCCCTTCGAAACAGTGCATCGCTGGCGGCGCCTCCCGCCCTGCGACG 184
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   121 CGCTCAACTTCGGGCCCTTCGAAACAGTGCATCGCTGGCGGCGCCTCCCGCCCTGCGACG 180

Query:   185 AGTTCGTGGGTGCCCGGCGCAGCAAGCACACAGTGGTGGCCTATAAAGATGCCATTTATG 244
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   181 AGTTCGTGGGTGCCCGGCGCAGCAAGCACACAGTGGTGGCCTATAAAGATGCCATTTATG 240

Query:   245 TATTTGGTGGAGACAATGGG 264
             ||||||||||||||||||||
Sbjct:   241 TATTTGGTGGAGACAATGGG 260


Parameters:
  warnings
  E=0.01
  cpus=8
  W=13
  hitdist=28
  X=50
  B=20
  V=20
  M=2
  N=-9
  S2=100
  S=100
  hspmax=10
  filter=dust
  progress=0

  ctxfactor=2.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Strand MatID Matrix name     Lambda    K       H      Lambda    K       H
   +1      0   +2,-9           0.692   0.562   1.37     same    same    same
               Q=10,R=10       0.692   0.562   1.37      n/a     n/a     n/a
   -1      0   +2,-9           0.692   0.562   1.37     same    same    same
               Q=10,R=10       0.692   0.562   1.37      n/a     n/a     n/a

  Query
  Strand MatID  Length  Eff.Length     E     S  W   T  X   E2      S2
   +1      0      795       795   2.4e-20  100 13 n/a 50  3.4e-25 100
                                                      19  3.4e-25 100
   -1      0      795       795   2.4e-20  100 13 n/a 50  3.4e-25 100
                                                      19  3.4e-25 100


Statistics:

  Database:  /bioinfo/gapdb/blastdb/ensembl_cdna
   Title:  /bioinfo/gapdb/blastdb/ensembl_cdna
   Posted:  4:53:09 PM EST Aug 9, 2001
   Format:  BLAST-1.4
   # of letters in database:  33,556,347
   # of sequences in database:  23,929
   # of database sequences satisfying E:  1
  No. of states in DFA:  241 (482 KB)
  Total size of DFA:  68 KB (1055 KB)
  Time to generate neighborhood:  0.01u 0.01s 0.03t  Elapsed: 00:00:04
  No. of threads or processors used:  4
  Search cpu time:  0.43u 0.06s 0.50t  Elapsed: 00:00:01
  Total cpu time:  0.48u 0.08s 0.56t  Elapsed: 00:00:07
  Start:  Thu Sep 27 13:40:31 2001   End:  Thu Sep 27 13:40:38 2001

WARNINGS SUPPRESSED:  2